2025
Induction of a mismatch repair deficient genotype by tailored chemical mutagenesis in experimental models of cancer
B Rousseau, M Patel, O Artz, G Vlachos, S Patel, O Hayatt, G Argilés, MB Foote, L Luo, R Shah, S Mehta, K Rangavajhula, CM Stewart, D Gerber, R Bhattacharya, D Stephens, D Mieles, V Randrian, S Abdelfattah, L Zhang, N Membreno-Berganza, MF Lamendola-Essel, F Piastra-Facon, J Vidal, P Johannet, S Lu, JR White, SB Maron, A Barlas, CM Weipert, E Rosiek, T Zhang, B He, S Monette, R Qu, D Fidele, S Bowker, A Kahn, PP Vitiello, G Germano, A Bardelli, R Mandal, X Ma, TA Chan, S Lu, A Cercek, O Abdel-Wahab, E de Stanchina, NH Segal & LA Diaz Jr.
Cancer Cell. 2025 Jul 14;43(7):1313–1327.e10.
2024
Neoantigen immunogenicity landscapes and evolution of tumor ecosystems during immunotherapy with nivolumab
TJ Alban, N Riaz, P Parthasarathy, V Makarov, S Kendall, S Yoo, R Shah, N Weinhold, R Srivastava, X Ma, C Krisha, JY Mok, WJE Esch, E Garon, W Akerley, B Creelan, N Aanur, D Chowell, WJ Geese, NA Rizvi & TA Chan.
Nature Medicine. https://doi.org/10.1038/s41591-024-03240-y
2022
A Targetable Myeloid Inflammatory State Governs Disease Recurrence in Clear Cell Renal Cell Carcinoma
PM Rappold, L Vuong, J Leibold, NH Chakiryan, M Curry, F Kuo, E Sabio, H Jiang, BG Nixon, M Liu, AE Berglund, AW Silagy, A Mascareno, M Golkaram, M Marker, A Reising, A Savchenko, JM Millholland, Y Chen, P Russo, J Coleman, E Reznik, BJ Manley, I Ostrovnaya, V Makarov, RG DiNatale, KA Blum, X Ma, D Chowell, MO Li, DB Solit, SW Lowe, TA Chan, RJ Motzer, MH Voss, AA Hakimi.
Cancer Discovery. https://doi.org/10.1158/2159-8290.CD-21-0925
2022
A complex leads to autophagic degradation of CDK2 in cancer cells
J Zhang, Y Gan, H Li, J Yin, X He, L Lin, S Xu, Z Fang, B Kim, L Gao, L Ding, E Zhang, X Ma, J Li, L Li, Y Xu, D Horne, R Xu, H Yu, Y Gu, W Huang.
Nature Commnunications. https://doi.org/10.1038/s41467-022-30264-0
2022
The Hippo Pathway Mediates Semaphorin Signaling
Z Meng, F Li, C Fang, B Yeoman, Y Qiu, Y Wang, X Cai, KC Lin, D Yang, M Luo, V Fu, X Ma, Y Diao, FG Giancotti, B Ren, AJ Engler, KL Guan.
Science Advances. https://doi.org/10.1126/sciadv.abl9806
2022
Phenotypic and Molecular States of IDH1 Mutation- Induced CD24-Positive Glioma Stem-Like Cells
S Haddock, TJ Alban, Ş Turcan, H Husic, E Rosiek, X Ma, Y Wang, T Bale, A Desrichard, V Makarov, S Monette, W Wu, R Gardner, K Manova, A Boire, TA Chan.
Neoplasia. https://10.1016/j.neo.2022.100790
2021
Improved prediction of immune checkpoint blockade efficacy across multiple cancer types
D Chowell, SK Yoo, C Valero, A Pastore, C Krishna, M Lee, D Hoen, H Shi, DW Kelly, N Patel, V Makarov, X Ma, L Vuong, EY Sabio, K Weiss, F Kuo, TL Lenz, RM Samstein, N Riaz, VBPS Adusumilli, G Plitas, AA Hakimi, O Abdel-Wahab, AN Shoushtari, MA Postow, RJ Motzer, M Ladanyi, A Zehir, MF Berger, M Gönen, LGT Morris, N Weinhold, TA Chan.
Nature Biotechnology. DOI: 10.1038/s41587-021-01070-8
2021
Qa-1b Modulates Resistance to Anti–PD-1 Immune Checkpoint Blockade in Tumors with Defects in Antigen Processing
X Zhang, E Sabio, C Krishna, X Ma, J Wang, H Jiang, JJ Havel, TA Chan
Molecular Cancer Research. DOI: https://doi.org/10.1158/1541-7786.MCR-20-0652
2021
Vertical sleeve gastrectomy confers metabolic improvements by reducing intestinal bile acids and lipid absorption in mice
L Ding, E Zhang, Q Yang, L Jin, KM Sousa, B Dong, Y Wang, J Tu, X Ma, J Tian, H Zhang, Z Fang, A Guan, Y Zhang, Z Wang, DD Moore, L Yang, W Huang.
Proceedings of the National Academy of Sciences (PNAS). https://doi.org/10.1073/pnas.2019388118.
2020
Targeting therapeutic vulnerabilities with PARP inhibition and radiation in IDH-mutant gliomas and cholangiocarcinomas
Y Wang, AT Wild, S Turcan, WH Wu, C Sigel, DS Klimstra, X Ma, Y Gong, EC Holland, JT Huse, TA Chan.
Science Advances, 2020 Apr 22;6(17):eaaz3221. doi: 10.1126/sciadv.aaz3221. eCollection 2020 Apr.
2019
Genetic diversity of tumors with mismatch repair deficiency influences anti–PD-1 immunotherapy response
R Mandal, RM Samstein, KW Lee, JJ Havel, H Wang, C Krishna, EY Sabio, V Makarov, F Kuo, P Blecua, AT Ramaswamy, JN Durham, B Bartlett, X Ma, RM Srivastava, S Middha, A Zehir, JF Hechtman, LGT Morris, N Weinhold, N Riaz, DT Le, LA Diaz Jr, TA Chan.
Science, 2019 May 3;364(6439):485-491 DOI: 10.1126/science.aau0447.